'empanada: what’s cool, what’s new and what’s next'

with Dr Kedar Narayan

About this Webinar

Description:

empanada is a napari plugin for panoptic segmentation workflows on 2D and 3D cellular EM images (https://empanada.readthedocs.io/en/latest/); it is designed to be used in resource- and expertise- limited settings. It allows facile model training, fine-tuning, inference and proof-reading, and comes with pre-trained generalist instance segmentation models  MitoNet, NucleoNet and DropNet. Here I discuss some of the background work and resources associated with creating empanada, and some examples of how it has enabled new insights in cell biology. I will include a simple show-and-tell tutorial on how to run empanada, including some features included in the latest release. 


Speaker biography:

TBC


Intended audience:

Learning outcomes:

This is open to anyone who is interested.


Level:

No prior knowledge is needed.


Resources:

  • TBC


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Upcoming - 'AI OnDemand...' with Dr Cameron Shand (21st July 2026)